J7_8C8Z_002
3D structure
- PDB id
- 8C8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 8C8Z|1|A|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8C8Z|1|A|C|817
8C8Z|1|A|G|818
8C8Z|1|A|A|819
8C8Z|1|A|A|820
8C8Z|1|A|A|821
8C8Z|1|A|G|822
*
8C8Z|1|A|C|835
8C8Z|1|A|G|836
8C8Z|1|A|C|837
8C8Z|1|A|C|838
*
8C8Z|1|A|G|940
8C8Z|1|A|A|941
8C8Z|1|A|G|942
8C8Z|1|A|A|943
8C8Z|1|A|C|944
8C8Z|1|A|A|945
8C8Z|1|A|C|946
*
8C8Z|1|A|G|971
8C8Z|1|A|A|972
8C8Z|1|A|A|973
8C8Z|1|A|G|974
8C8Z|1|A|A|975
8C8Z|1|A|G|976
*
8C8Z|1|A|C|987
8C8Z|1|A|A|988
8C8Z|1|A|G|989
8C8Z|1|A|A|990
8C8Z|1|A|C|991
*
8C8Z|1|A|G|1163
8C8Z|1|A|C|1164
*
8C8Z|1|A|G|1185
8C8Z|1|A|G|1186
8C8Z|1|A|G|1187
8C8Z|1|A|U|1188
8C8Z|1|A|A|1189
8C8Z|1|A|G|1190
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain Z
- 50S ribosomal protein L30
Coloring options: