J7_8E33_002
3D structure
- PDB id
- 8E33 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to compound streptogramin analog SAB001
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.23 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 8E33|1|I|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8E33|1|I|C|817
8E33|1|I|G|818
8E33|1|I|A|819
8E33|1|I|A|820
8E33|1|I|A|821
8E33|1|I|G|822
*
8E33|1|I|C|835
8E33|1|I|G|836
8E33|1|I|C|837
8E33|1|I|C|838
*
8E33|1|I|G|940
8E33|1|I|A|941
8E33|1|I|G|942
8E33|1|I|A|943
8E33|1|I|C|944
8E33|1|I|A|945
8E33|1|I|C|946
*
8E33|1|I|G|971
8E33|1|I|A|972
8E33|1|I|A|973
8E33|1|I|G|974
8E33|1|I|A|975
8E33|1|I|G|976
*
8E33|1|I|C|987
8E33|1|I|A|988
8E33|1|I|G|989
8E33|1|I|A|990
8E33|1|I|C|991
*
8E33|1|I|G|1163
8E33|1|I|C|1164
*
8E33|1|I|G|1185
8E33|1|I|G|1186
8E33|1|I|G|1187
8E33|1|I|U|1188
8E33|1|I|A|1189
8E33|1|I|G|1190
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L15
Coloring options: