J7_8E3L_002

3D structure

PDB id

8E3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to D-linker solithromycin conjugate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

8E3L|1|I|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3L|1|I|C|817
8E3L|1|I|G|818
8E3L|1|I|A|819
8E3L|1|I|A|820
8E3L|1|I|A|821
8E3L|1|I|G|822
*
8E3L|1|I|C|835
8E3L|1|I|G|836
8E3L|1|I|C|837
8E3L|1|I|C|838
*
8E3L|1|I|G|940
8E3L|1|I|A|941
8E3L|1|I|G|942
8E3L|1|I|A|943
8E3L|1|I|C|944
8E3L|1|I|A|945
8E3L|1|I|C|946
*
8E3L|1|I|G|971
8E3L|1|I|A|972
8E3L|1|I|A|973
8E3L|1|I|G|974
8E3L|1|I|A|975
8E3L|1|I|G|976
*
8E3L|1|I|C|987
8E3L|1|I|A|988
8E3L|1|I|G|989
8E3L|1|I|A|990
8E3L|1|I|C|991
*
8E3L|1|I|G|1163
8E3L|1|I|C|1164
*
8E3L|1|I|G|1185
8E3L|1|I|G|1186
8E3L|1|I|G|1187
8E3L|1|I|U|1188
8E3L|1|I|A|1189
8E3L|1|I|G|1190

Current chains

Chain I

50S ribosomal RNA

Nearby chains

Chain J

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L15