J7_8E3M_001
3D structure
- PDB id
- 8E3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to L-linker solithromycin conjugate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 8E3M|1|I|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8E3M|1|I|C|8
8E3M|1|I|G|9
8E3M|1|I|A|10
8E3M|1|I|C|11
8E3M|1|I|U|12
8E3M|1|I|A|13
8E3M|1|I|A|14
8E3M|1|I|G|15
*
8E3M|1|I|U|525
8E3M|1|I|A|526
8E3M|1|I|C|527
8E3M|1|I|A|528
8E3M|1|I|A|529
8E3M|1|I|G|530
8E3M|1|I|C|531
*
8E3M|1|I|G|2018
8E3M|1|I|A|2019
8E3M|1|I|A|2020
8E3M|1|I|C|2021
8E3M|1|I|U|2022
8E3M|1|I|C|2023
*
8E3M|1|I|G|2040
8E3M|1|I|U|2041
8E3M|1|I|A|2042
8E3M|1|I|C|2043
*
8E3M|1|I|G|2625
8E3M|1|I|C|2626
8E3M|1|I|G|2627
8E3M|1|I|C|2628
8E3M|1|I|U|2629
8E3M|1|I|G|2630
*
8E3M|1|I|C|2788
8E3M|1|I|C|2789
*
8E3M|1|I|G|2894
8E3M|1|I|G|2895
Current chains
- Chain I
- 50S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L13
- Chain P
- 50S ribosomal protein L22
- Chain Q
- 50S ribosomal protein L32
Coloring options: