J7_8FKP_001
3D structure
- PDB id
- 8FKP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKP|1|L3|C|1666
8FKP|1|L3|G|1667
8FKP|1|L3|A|1668
8FKP|1|L3|A|1669
8FKP|1|L3|G|1670
8FKP|1|L3|U|1671
*
8FKP|1|L3|A|1684
8FKP|1|L3|G|1685
*
8FKP|1|L3|U|1852
8FKP|1|L3|G|1853
8FKP|1|L3|G|1854
8FKP|1|L3|G|1855
*
8FKP|1|L3|C|1879
8FKP|1|L3|G|1880
8FKP|1|L3|C|1881
8FKP|1|L3|U|1882
8FKP|1|L3|G|1883
8FKP|1|L3|C|1884
*
8FKP|1|L3|G|1895
8FKP|1|L3|A|1896
8FKP|1|L3|A|1897
8FKP|1|L3|C|1898
8FKP|1|L3|G|1899
*
8FKP|1|L3|C|2077
8FKP|1|L3|C|2078
*
8FKP|1|L3|G|2278
8FKP|1|L3|A|2279
8FKP|1|L3|G|2280
8FKP|1|L3|U|2281
8FKP|1|L3|A|2282
8FKP|1|L3|G|2283
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LE
- 60S ribosomal protein L21
- Chain LK
- 60S ribosomal protein L27a
- Chain LQ
- 60S ribosomal protein L32
- Chain LT
- 60S ribosomal protein L35a
- Chain NE
- Surfeit locus protein 6
- Chain SA
- 60S ribosomal protein L4
- Chain SD
- 60S ribosomal protein L7
- Chain SN
- Probable rRNA-processing protein EBP2
Coloring options: