J7_8FLB_002

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG

Length

31 nucleotides

Bulged bases

8FLB|1|L3|C|1881

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLB|1|L3|C|1666
8FLB|1|L3|G|1667
8FLB|1|L3|A|1668
8FLB|1|L3|A|1669
8FLB|1|L3|G|1670
8FLB|1|L3|U|1671
*
8FLB|1|L3|A|1684
8FLB|1|L3|G|1685
*
8FLB|1|L3|U|1852
8FLB|1|L3|G|1853
8FLB|1|L3|G|1854
8FLB|1|L3|G|1855
*
8FLB|1|L3|C|1879
8FLB|1|L3|G|1880
8FLB|1|L3|C|1881
8FLB|1|L3|U|1882
8FLB|1|L3|G|1883
8FLB|1|L3|C|1884
*
8FLB|1|L3|G|1895
8FLB|1|L3|A|1896
8FLB|1|L3|A|1897
8FLB|1|L3|C|1898
8FLB|1|L3|G|1899
*
8FLB|1|L3|C|2077
8FLB|1|L3|C|2078
*
8FLB|1|L3|G|2278
8FLB|1|L3|A|2279
8FLB|1|L3|G|2280
8FLB|1|L3|U|2281
8FLB|1|L3|A|2282
8FLB|1|L3|G|2283

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L4

5S ribosomal RNA; 5S rRNA

Chain L6

60S ribosomal protein L13

Chain LB

60S ribosomal protein L18

Chain LE

60S ribosomal protein L21

Chain LK

60S ribosomal protein L27a

Chain LM

60S ribosomal protein L29

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SA

60S ribosomal protein L4

Chain SD

60S ribosomal protein L7