3D structure

PDB id
8FLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K3)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
CGAAGU*AGC*GUGGG*CGCUGC*GAACG*CC*GAGUAG
Length
33 nucleotides
Bulged bases
8FLC|1|L3|C|1881
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLC|1|L3|C|1666
8FLC|1|L3|G|1667
8FLC|1|L3|A|1668
8FLC|1|L3|A|1669
8FLC|1|L3|G|1670
8FLC|1|L3|U|1671
*
8FLC|1|L3|A|1684
8FLC|1|L3|G|1685
8FLC|1|L3|C|1686
*
8FLC|1|L3|G|1851
8FLC|1|L3|U|1852
8FLC|1|L3|G|1853
8FLC|1|L3|G|1854
8FLC|1|L3|G|1855
*
8FLC|1|L3|C|1879
8FLC|1|L3|G|1880
8FLC|1|L3|C|1881
8FLC|1|L3|U|1882
8FLC|1|L3|G|1883
8FLC|1|L3|C|1884
*
8FLC|1|L3|G|1895
8FLC|1|L3|A|1896
8FLC|1|L3|A|1897
8FLC|1|L3|C|1898
8FLC|1|L3|G|1899
*
8FLC|1|L3|C|2077
8FLC|1|L3|C|2078
*
8FLC|1|L3|G|2278
8FLC|1|L3|A|2279
8FLC|1|L3|G|2280
8FLC|1|L3|U|2281
8FLC|1|L3|A|2282
8FLC|1|L3|G|2283

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L4
5S ribosomal RNA; 5S rRNA
Chain L6
60S ribosomal protein L13
Chain LB
60S ribosomal protein L18
Chain LE
60S ribosomal protein L21
Chain LK
60S ribosomal protein L27a
Chain LM
60S ribosomal protein L29
Chain LQ
60S ribosomal protein L32
Chain LT
60S ribosomal protein L35a
Chain SA
60S ribosomal protein L4
Chain SD
60S ribosomal protein L7

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2281 s