J7_8FLD_001

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG

Length

31 nucleotides

Bulged bases

8FLD|1|L3|U|1882

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|C|1666
8FLD|1|L3|G|1667
8FLD|1|L3|A|1668
8FLD|1|L3|A|1669
8FLD|1|L3|G|1670
8FLD|1|L3|U|1671
*
8FLD|1|L3|A|1684
8FLD|1|L3|G|1685
*
8FLD|1|L3|U|1852
8FLD|1|L3|G|1853
8FLD|1|L3|G|1854
8FLD|1|L3|G|1855
*
8FLD|1|L3|C|1879
8FLD|1|L3|G|1880
8FLD|1|L3|C|1881
8FLD|1|L3|U|1882
8FLD|1|L3|G|1883
8FLD|1|L3|C|1884
*
8FLD|1|L3|G|1895
8FLD|1|L3|A|1896
8FLD|1|L3|A|1897
8FLD|1|L3|C|1898
8FLD|1|L3|G|1899
*
8FLD|1|L3|C|2077
8FLD|1|L3|C|2078
*
8FLD|1|L3|G|2278
8FLD|1|L3|A|2279
8FLD|1|L3|G|2280
8FLD|1|L3|U|2281
8FLD|1|L3|A|2282
8FLD|1|L3|G|2283

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L4

5S ribosomal RNA; 5S rRNA

Chain L6

60S ribosomal protein L13

Chain LB

60S ribosomal protein L18

Chain LE

60S ribosomal protein L21

Chain LK

60S ribosomal protein L27a

Chain LM

60S ribosomal protein L29

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SA

60S ribosomal protein L4

Chain SD

60S ribosomal protein L7