J7_8FZD_001
3D structure
- PDB id
- 8FZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 8FZD|1|A|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FZD|1|A|C|8
8FZD|1|A|G|9
8FZD|1|A|A|10
8FZD|1|A|C|11
8FZD|1|A|U|12
8FZD|1|A|A|13
8FZD|1|A|A|14
8FZD|1|A|G|15
*
8FZD|1|A|U|525
8FZD|1|A|A|526
8FZD|1|A|C|527
8FZD|1|A|A|528
8FZD|1|A|A|529
8FZD|1|A|G|530
8FZD|1|A|C|531
*
8FZD|1|A|G|2018
8FZD|1|A|A|2019
8FZD|1|A|A|2020
8FZD|1|A|C|2021
8FZD|1|A|U|2022
8FZD|1|A|C|2023
*
8FZD|1|A|G|2040
8FZD|1|A|U|2041
8FZD|1|A|A|2042
8FZD|1|A|C|2043
*
8FZD|1|A|G|2625
8FZD|1|A|C|2626
8FZD|1|A|G|2627
8FZD|1|A|C|2628
8FZD|1|A|U|2629
8FZD|1|A|G|2630
*
8FZD|1|A|C|2788
8FZD|1|A|C|2789
*
8FZD|1|A|G|2894
8FZD|1|A|G|2895
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain L
- 50S ribosomal protein L13
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L22
Coloring options: