3D structure

PDB id
8FZE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8FZE|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FZE|1|A|C|817
8FZE|1|A|G|818
8FZE|1|A|A|819
8FZE|1|A|A|820
8FZE|1|A|A|821
8FZE|1|A|G|822
*
8FZE|1|A|C|835
8FZE|1|A|G|836
8FZE|1|A|C|837
8FZE|1|A|C|838
*
8FZE|1|A|G|940
8FZE|1|A|A|941
8FZE|1|A|G|942
8FZE|1|A|A|943
8FZE|1|A|C|944
8FZE|1|A|A|945
8FZE|1|A|C|946
*
8FZE|1|A|G|971
8FZE|1|A|A|972
8FZE|1|A|A|973
8FZE|1|A|G|974
8FZE|1|A|A|975
8FZE|1|A|G|976
*
8FZE|1|A|C|987
8FZE|1|A|A|988
8FZE|1|A|G|989
8FZE|1|A|A|990
8FZE|1|A|C|991
*
8FZE|1|A|G|1163
8FZE|1|A|C|1164
*
8FZE|1|A|G|1185
8FZE|1|A|G|1186
8FZE|1|A|G|1187
8FZE|1|A|U|1188
8FZE|1|A|A|1189
8FZE|1|A|G|1190

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L15
Chain S
50S ribosomal protein L20
Chain T
Ribosomal protein L21

Coloring options:

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