J7_8G38_001

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

8G38|1|B|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G38|1|B|C|8
8G38|1|B|G|9
8G38|1|B|A|10
8G38|1|B|C|11
8G38|1|B|U|12
8G38|1|B|A|13
8G38|1|B|A|14
8G38|1|B|G|15
*
8G38|1|B|U|525
8G38|1|B|A|526
8G38|1|B|C|527
8G38|1|B|A|528
8G38|1|B|A|529
8G38|1|B|G|530
8G38|1|B|C|531
*
8G38|1|B|G|2018
8G38|1|B|A|2019
8G38|1|B|A|2020
8G38|1|B|C|2021
8G38|1|B|U|2022
8G38|1|B|C|2023
*
8G38|1|B|G|2040
8G38|1|B|U|2041
8G38|1|B|A|2042
8G38|1|B|C|2043
*
8G38|1|B|G|2625
8G38|1|B|C|2626
8G38|1|B|G|2627
8G38|1|B|C|2628
8G38|1|B|U|2629
8G38|1|B|G|2630
*
8G38|1|B|C|2788
8G38|1|B|C|2789
*
8G38|1|B|G|2894
8G38|1|B|G|2895

Current chains

Chain B

23S

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22