3D structure

PDB id
8G7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
8G7Q|1|A|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G7Q|1|A|C|8
8G7Q|1|A|G|9
8G7Q|1|A|A|10
8G7Q|1|A|C|11
8G7Q|1|A|U|12
8G7Q|1|A|A|13
8G7Q|1|A|A|14
8G7Q|1|A|G|15
*
8G7Q|1|A|U|525
8G7Q|1|A|A|526
8G7Q|1|A|C|527
8G7Q|1|A|A|528
8G7Q|1|A|A|529
8G7Q|1|A|G|530
8G7Q|1|A|C|531
*
8G7Q|1|A|G|2018
8G7Q|1|A|A|2019
8G7Q|1|A|A|2020
8G7Q|1|A|C|2021
8G7Q|1|A|U|2022
8G7Q|1|A|C|2023
*
8G7Q|1|A|G|2040
8G7Q|1|A|U|2041
8G7Q|1|A|A|2042
8G7Q|1|A|C|2043
*
8G7Q|1|A|G|2625
8G7Q|1|A|C|2626
8G7Q|1|A|G|2627
8G7Q|1|A|C|2628
8G7Q|1|A|U|2629
8G7Q|1|A|G|2630
*
8G7Q|1|A|C|2788
8G7Q|1|A|C|2789
*
8G7Q|1|A|G|2894
8G7Q|1|A|G|2895

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain L
50S ribosomal protein L13
Chain S
50S ribosomal protein L20
Chain U
50S ribosomal protein L22

Coloring options:

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