3D structure

PDB id
8P18 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E167K RF2 on E. coli 70S release complex with UGG (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
8P18|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8P18|1|1|C|8
8P18|1|1|G|9
8P18|1|1|A|10
8P18|1|1|C|11
8P18|1|1|U|12
8P18|1|1|A|13
8P18|1|1|A|14
8P18|1|1|G|15
*
8P18|1|1|U|525
8P18|1|1|A|526
8P18|1|1|C|527
8P18|1|1|A|528
8P18|1|1|A|529
8P18|1|1|G|530
8P18|1|1|C|531
*
8P18|1|1|G|2018
8P18|1|1|A|2019
8P18|1|1|A|2020
8P18|1|1|C|2021
8P18|1|1|U|2022
8P18|1|1|C|2023
*
8P18|1|1|G|2040
8P18|1|1|U|2041
8P18|1|1|A|2042
8P18|1|1|C|2043
*
8P18|1|1|G|2625
8P18|1|1|C|2626
8P18|1|1|G|2627
8P18|1|1|C|2628
8P18|1|1|U|2629
8P18|1|1|G|2630
*
8P18|1|1|C|2788
8P18|1|1|C|2789
*
8P18|1|1|G|2894
8P18|1|1|G|2895

Current chains

Chain 1
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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