J7_8PEG_001

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

8PEG|1|7|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PEG|1|7|C|8
8PEG|1|7|G|9
8PEG|1|7|A|10
8PEG|1|7|C|11
8PEG|1|7|U|12
8PEG|1|7|A|13
8PEG|1|7|A|14
8PEG|1|7|G|15
*
8PEG|1|7|U|525
8PEG|1|7|A|526
8PEG|1|7|C|527
8PEG|1|7|A|528
8PEG|1|7|A|529
8PEG|1|7|G|530
8PEG|1|7|C|531
*
8PEG|1|7|G|2018
8PEG|1|7|A|2019
8PEG|1|7|A|2020
8PEG|1|7|C|2021
8PEG|1|7|U|2022
8PEG|1|7|C|2023
*
8PEG|1|7|G|2040
8PEG|1|7|U|2041
8PEG|1|7|A|2042
8PEG|1|7|C|2043
*
8PEG|1|7|G|2625
8PEG|1|7|C|2626
8PEG|1|7|G|2627
8PEG|1|7|C|2628
8PEG|1|7|U|2629
8PEG|1|7|G|2630
*
8PEG|1|7|C|2788
8PEG|1|7|C|2789
*
8PEG|1|7|G|2894
8PEG|1|7|G|2895

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L32

Chain c

50S ribosomal protein L3

Chain m

50S ribosomal protein L13

Chain t

50S ribosomal protein L20

Chain v

50S ribosomal protein L22