3D structure

PDB id
8QK7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E167K RF2 on E. coli 70S release complex with UAA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8QK7|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QK7|1|1|C|817
8QK7|1|1|G|818
8QK7|1|1|A|819
8QK7|1|1|A|820
8QK7|1|1|A|821
8QK7|1|1|G|822
*
8QK7|1|1|C|835
8QK7|1|1|G|836
8QK7|1|1|C|837
8QK7|1|1|C|838
*
8QK7|1|1|G|940
8QK7|1|1|A|941
8QK7|1|1|G|942
8QK7|1|1|A|943
8QK7|1|1|C|944
8QK7|1|1|A|945
8QK7|1|1|C|946
*
8QK7|1|1|G|971
8QK7|1|1|A|972
8QK7|1|1|A|973
8QK7|1|1|G|974
8QK7|1|1|A|975
8QK7|1|1|G|976
*
8QK7|1|1|C|987
8QK7|1|1|A|988
8QK7|1|1|G|989
8QK7|1|1|A|990
8QK7|1|1|C|991
*
8QK7|1|1|G|1163
8QK7|1|1|C|1164
*
8QK7|1|1|G|1185
8QK7|1|1|G|1186
8QK7|1|1|G|1187
8QK7|1|1|U|1188
8QK7|1|1|A|1189
8QK7|1|1|G|1190

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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