J7_8RCL_002

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

8RCL|1|72|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCL|1|72|C|817
8RCL|1|72|G|818
8RCL|1|72|A|819
8RCL|1|72|A|820
8RCL|1|72|A|821
8RCL|1|72|G|822
*
8RCL|1|72|C|835
8RCL|1|72|G|836
8RCL|1|72|C|837
8RCL|1|72|C|838
*
8RCL|1|72|G|940
8RCL|1|72|A|941
8RCL|1|72|G|942
8RCL|1|72|A|943
8RCL|1|72|C|944
8RCL|1|72|A|945
8RCL|1|72|C|946
*
8RCL|1|72|G|971
8RCL|1|72|A|972
8RCL|1|72|A|973
8RCL|1|72|G|974
8RCL|1|72|A|975
8RCL|1|72|G|976
*
8RCL|1|72|C|987
8RCL|1|72|A|988
8RCL|1|72|G|989
8RCL|1|72|A|990
8RCL|1|72|C|991
*
8RCL|1|72|G|1163
8RCL|1|72|C|1164
*
8RCL|1|72|G|1185
8RCL|1|72|G|1186
8RCL|1|72|G|1187
8RCL|1|72|U|1188
8RCL|1|72|A|1189
8RCL|1|72|G|1190

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 32

50S ribosomal protein L30

Chain 62

50S ribosomal protein L35

Chain 82

5S ribosomal RNA; 5S rRNA

Chain o2

50S ribosomal protein L15