J7_8RDW_001
3D structure
- PDB id
- 8RDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- UAAUGAAG*UACAAGC*GAAAUC*GUAC*GCGUUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 8RDW|1|Z2|A|2007
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RDW|1|Z2|U|15
8RDW|1|Z2|A|16
8RDW|1|Z2|A|17
8RDW|1|Z2|U|18
8RDW|1|Z2|G|19
8RDW|1|Z2|A|20
8RDW|1|Z2|A|21
8RDW|1|Z2|G|22
*
8RDW|1|Z2|U|508
8RDW|1|Z2|A|509
8RDW|1|Z2|C|510
8RDW|1|Z2|A|511
8RDW|1|Z2|A|512
8RDW|1|Z2|G|513
8RDW|1|Z2|C|514
*
8RDW|1|Z2|G|2004
8RDW|1|Z2|A|2005
8RDW|1|Z2|A|2006
8RDW|1|Z2|A|2007
8RDW|1|Z2|U|2008
8RDW|1|Z2|C|2009
*
8RDW|1|Z2|G|2026
8RDW|1|Z2|U|2027
8RDW|1|Z2|A|2028
8RDW|1|Z2|C|2029
*
8RDW|1|Z2|G|2608
8RDW|1|Z2|C|2609
8RDW|1|Z2|G|2610
8RDW|1|Z2|U|2611
8RDW|1|Z2|U|2612
8RDW|1|Z2|G|2613
*
8RDW|1|Z2|C|2771
8RDW|1|Z2|C|2772
*
8RDW|1|Z2|G|2860
8RDW|1|Z2|G|2861
Current chains
- Chain Z2
- 23S rRNA
Nearby chains
- Chain Af
- Large ribosomal subunit protein uL3
- Chain IX
- Large ribosomal subunit protein uL13
- Chain PO
- Large ribosomal subunit protein bL20
- Chain Qb
- Large ribosomal subunit protein bL21
- Chain RF
- Large ribosomal subunit protein uL22
- Chain aA
- Large ribosomal subunit protein bL32
Coloring options: