J7_8RDW_002
3D structure
- PDB id
- 8RDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GGAGAG*CAGAC*GA*UGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 8RDW|1|Z2|A|929
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RDW|1|Z2|C|802
8RDW|1|Z2|G|803
8RDW|1|Z2|A|804
8RDW|1|Z2|A|805
8RDW|1|Z2|A|806
8RDW|1|Z2|G|807
*
8RDW|1|Z2|C|820
8RDW|1|Z2|G|821
8RDW|1|Z2|C|822
8RDW|1|Z2|C|823
*
8RDW|1|Z2|G|924
8RDW|1|Z2|A|925
8RDW|1|Z2|G|926
8RDW|1|Z2|A|927
8RDW|1|Z2|C|928
8RDW|1|Z2|A|929
8RDW|1|Z2|C|930
*
8RDW|1|Z2|G|955
8RDW|1|Z2|G|956
8RDW|1|Z2|A|957
8RDW|1|Z2|G|958
8RDW|1|Z2|A|959
8RDW|1|Z2|G|960
*
8RDW|1|Z2|C|971
8RDW|1|Z2|A|972
8RDW|1|Z2|G|973
8RDW|1|Z2|A|974
8RDW|1|Z2|C|975
*
8RDW|1|Z2|G|1148
8RDW|1|Z2|A|1149
*
8RDW|1|Z2|U|1169
8RDW|1|Z2|G|1170
8RDW|1|Z2|G|1171
8RDW|1|Z2|U|1172
8RDW|1|Z2|A|1173
8RDW|1|Z2|G|1174
Current chains
- Chain Z2
- 23S rRNA
Nearby chains
- Chain D8
- 5S ribosomal RNA; 5S rRNA
- Chain Kd
- Large ribosomal subunit protein uL15
- Chain PO
- Large ribosomal subunit protein bL20
- Chain Qb
- Large ribosomal subunit protein bL21
- Chain YW
- Large ribosomal subunit protein uL30
- Chain dh
- Large ribosomal subunit protein bL35
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