3D structure

PDB id
8UTJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8UTJ|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UTJ|1|1|C|817
8UTJ|1|1|G|818
8UTJ|1|1|A|819
8UTJ|1|1|A|820
8UTJ|1|1|A|821
8UTJ|1|1|G|822
*
8UTJ|1|1|C|835
8UTJ|1|1|G|836
8UTJ|1|1|C|837
8UTJ|1|1|C|838
*
8UTJ|1|1|G|940
8UTJ|1|1|A|941
8UTJ|1|1|G|942
8UTJ|1|1|A|943
8UTJ|1|1|C|944
8UTJ|1|1|A|945
8UTJ|1|1|C|946
*
8UTJ|1|1|G|971
8UTJ|1|1|A|972
8UTJ|1|1|A|973
8UTJ|1|1|G|974
8UTJ|1|1|A|975
8UTJ|1|1|G|976
*
8UTJ|1|1|C|987
8UTJ|1|1|A|988
8UTJ|1|1|G|989
8UTJ|1|1|A|990
8UTJ|1|1|C|991
*
8UTJ|1|1|G|1163
8UTJ|1|1|C|1164
*
8UTJ|1|1|G|1185
8UTJ|1|1|G|1186
8UTJ|1|1|G|1187
8UTJ|1|1|U|1188
8UTJ|1|1|A|1189
8UTJ|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
Ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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