J7_8UU4_001
3D structure
- PDB id
- 8UU4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 8UU4|1|A|G|575, 8UU4|1|A|G|2054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU4|1|A|U|8
8UU4|1|A|U|9
8UU4|1|A|A|10
8UU4|1|A|G|11
8UU4|1|A|A|12
8UU4|1|A|A|13
8UU4|1|A|A|14
8UU4|1|A|G|15
*
8UU4|1|A|U|570
8UU4|1|A|A|571
8UU4|1|A|C|572
8UU4|1|A|A|573
8UU4|1|A|A|574
8UU4|1|A|G|575
8UU4|1|A|U|576
*
8UU4|1|A|A|2051
8UU4|1|A|U|2052
8UU4|1|A|A|2053
8UU4|1|A|G|2054
8UU4|1|A|U|2055
8UU4|1|A|A|2056
*
8UU4|1|A|U|2073
8UU4|1|A|U|2074
8UU4|1|A|A|2075
8UU4|1|A|C|2076
*
8UU4|1|A|G|2658
8UU4|1|A|C|2659
8UU4|1|A|G|2660
8UU4|1|A|C|2661
8UU4|1|A|A|2662
8UU4|1|A|G|2663
*
8UU4|1|A|C|2821
8UU4|1|A|C|2822
*
8UU4|1|A|G|2922
8UU4|1|A|A|2923
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL32
- Chain D
- Large ribosomal subunit protein uL3
- Chain L
- Large ribosomal subunit protein uL13
- Chain S
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein uL22
Coloring options: