J7_8UU7_001
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAU*AGCC*GAGUCAG*CGAAAG*CAGAC*GA*UGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 8UU7|1|A|A|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU7|1|A|C|863
8UU7|1|A|G|864
8UU7|1|A|A|865
8UU7|1|A|A|866
8UU7|1|A|A|867
8UU7|1|A|U|868
*
8UU7|1|A|A|881
8UU7|1|A|G|882
8UU7|1|A|C|883
8UU7|1|A|C|884
*
8UU7|1|A|G|986
8UU7|1|A|A|987
8UU7|1|A|G|988
8UU7|1|A|U|989
8UU7|1|A|C|990
8UU7|1|A|A|991
8UU7|1|A|G|992
*
8UU7|1|A|C|1017
8UU7|1|A|G|1018
8UU7|1|A|A|1019
8UU7|1|A|A|1020
8UU7|1|A|A|1021
8UU7|1|A|G|1022
*
8UU7|1|A|C|1033
8UU7|1|A|A|1034
8UU7|1|A|G|1035
8UU7|1|A|A|1036
8UU7|1|A|C|1037
*
8UU7|1|A|G|1209
8UU7|1|A|A|1210
*
8UU7|1|A|U|1231
8UU7|1|A|G|1232
8UU7|1|A|G|1233
8UU7|1|A|U|1234
8UU7|1|A|A|1235
8UU7|1|A|G|1236
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein uL30
- Chain 7
- Large ribosomal subunit protein bL35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- Large ribosomal subunit protein uL15
- Chain S
- Large ribosomal subunit protein bL20
- Chain T
- Large ribosomal subunit protein bL21
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