3D structure

PDB id
8UXA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAAAU*AG*UCAG*CUAAAG*CAGAU*AA*UGGUAA
Length
31 nucleotides
Bulged bases
8UXA|1|A|A|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UXA|1|A|U|708
8UXA|1|A|G|709
8UXA|1|A|A|710
8UXA|1|A|A|711
8UXA|1|A|A|712
8UXA|1|A|U|713
*
8UXA|1|A|A|726
8UXA|1|A|G|727
*
8UXA|1|A|U|869
8UXA|1|A|C|870
8UXA|1|A|A|871
8UXA|1|A|G|872
*
8UXA|1|A|C|897
8UXA|1|A|U|898
8UXA|1|A|A|899
8UXA|1|A|A|900
8UXA|1|A|A|901
8UXA|1|A|G|902
*
8UXA|1|A|C|913
8UXA|1|A|A|914
8UXA|1|A|G|915
8UXA|1|A|A|916
8UXA|1|A|U|917
*
8UXA|1|A|A|1183
8UXA|1|A|A|1184
*
8UXA|1|A|U|1219
8UXA|1|A|G|1220
8UXA|1|A|G|1221
8UXA|1|A|U|1222
8UXA|1|A|A|1223
8UXA|1|A|A|1224

Current chains

Chain A
Large ribosomal subunit rRNA

Nearby chains

Chain 4
Large ribosomal subunit protein mL43
Chain J
Large ribosomal subunit protein uL15m
Chain N
Large ribosomal subunit protein bL21m
Chain U
Large ribosomal subunit protein uL30m
Chain c
Large ribosomal subunit protein mL60

Coloring options:

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