3D structure

PDB id
8V03 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
8V03|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8V03|1|1|C|817
8V03|1|1|G|818
8V03|1|1|A|819
8V03|1|1|A|820
8V03|1|1|A|821
8V03|1|1|G|822
*
8V03|1|1|C|835
8V03|1|1|G|836
8V03|1|1|C|837
*
8V03|1|1|G|942
8V03|1|1|A|943
8V03|1|1|C|944
8V03|1|1|A|945
8V03|1|1|C|946
*
8V03|1|1|G|971
8V03|1|1|A|972
8V03|1|1|A|973
8V03|1|1|G|974
8V03|1|1|A|975
8V03|1|1|G|976
*
8V03|1|1|C|987
8V03|1|1|A|988
8V03|1|1|G|989
8V03|1|1|A|990
8V03|1|1|C|991
*
8V03|1|1|G|1163
8V03|1|1|C|1164
*
8V03|1|1|G|1185
8V03|1|1|G|1186
8V03|1|1|G|1187
8V03|1|1|U|1188
8V03|1|1|A|1189
8V03|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
Large ribosomal subunit protein bL21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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