J7_8V9J_001
3D structure
- PDB id
- 8V9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAU*AG*UGGG*CGAGAG*CAGAU*GC*GGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 8V9J|1|A|G|1062
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V9J|1|A|C|932
8V9J|1|A|G|933
8V9J|1|A|A|934
8V9J|1|A|A|935
8V9J|1|A|A|936
8V9J|1|A|U|937
*
8V9J|1|A|A|950
8V9J|1|A|G|951
*
8V9J|1|A|U|1060
8V9J|1|A|G|1061
8V9J|1|A|G|1062
8V9J|1|A|G|1063
*
8V9J|1|A|C|1089
8V9J|1|A|G|1090
8V9J|1|A|A|1091
8V9J|1|A|G|1092
8V9J|1|A|A|1093
8V9J|1|A|G|1094
*
8V9J|1|A|C|1105
8V9J|1|A|A|1106
8V9J|1|A|G|1107
8V9J|1|A|A|1108
8V9J|1|A|U|1109
*
8V9J|1|A|G|1282
8V9J|1|A|C|1283
*
8V9J|1|A|G|1300
8V9J|1|A|G|1301
8V9J|1|A|G|1302
8V9J|1|A|U|1303
8V9J|1|A|A|1304
8V9J|1|A|G|1305
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L30
- Chain 7
- 50S ribosomal protein L35
- Chain 9
- 50S Ribosomal Protein L37
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- 50S ribosomal protein L15
- Chain S
- 50S Ribosomal Protein L20
- Chain T
- 50S Ribosomal Protein L21
Coloring options: