J7_8Y36_001
3D structure
- PDB id
- 8Y36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 8Y36|1|A|G|575, 8Y36|1|A|G|2048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y36|1|A|U|8
8Y36|1|A|U|9
8Y36|1|A|A|10
8Y36|1|A|U|11
8Y36|1|A|U|12
8Y36|1|A|A|13
8Y36|1|A|A|14
8Y36|1|A|G|15
*
8Y36|1|A|U|570
8Y36|1|A|A|571
8Y36|1|A|C|572
8Y36|1|A|A|573
8Y36|1|A|A|574
8Y36|1|A|G|575
8Y36|1|A|U|576
*
8Y36|1|A|A|2045
8Y36|1|A|U|2046
8Y36|1|A|A|2047
8Y36|1|A|G|2048
8Y36|1|A|U|2049
8Y36|1|A|A|2050
*
8Y36|1|A|U|2067
8Y36|1|A|U|2068
8Y36|1|A|A|2069
8Y36|1|A|C|2070
*
8Y36|1|A|G|2652
8Y36|1|A|C|2653
8Y36|1|A|G|2654
8Y36|1|A|U|2655
8Y36|1|A|A|2656
8Y36|1|A|G|2657
*
8Y36|1|A|C|2815
8Y36|1|A|C|2816
*
8Y36|1|A|G|2913
8Y36|1|A|A|2914
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain H
- Large ribosomal subunit protein uL13
- Chain O
- Large ribosomal subunit protein bL20
- Chain P
- Large ribosomal subunit protein bL21
- Chain Q
- Large ribosomal subunit protein uL22
- Chain Z
- Large ribosomal subunit protein bL32
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