3D structure

PDB id
8ZTV (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome arrested by PepNL with RF2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
8ZTV|1|a|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ZTV|1|a|C|817
8ZTV|1|a|G|818
8ZTV|1|a|A|819
8ZTV|1|a|A|820
8ZTV|1|a|A|821
8ZTV|1|a|G|822
*
8ZTV|1|a|C|835
8ZTV|1|a|G|836
8ZTV|1|a|C|837
8ZTV|1|a|C|838
*
8ZTV|1|a|G|940
8ZTV|1|a|A|941
8ZTV|1|a|G|942
8ZTV|1|a|A|943
8ZTV|1|a|C|944
8ZTV|1|a|A|945
8ZTV|1|a|C|946
*
8ZTV|1|a|G|971
8ZTV|1|a|A|972
8ZTV|1|a|A|973
8ZTV|1|a|G|974
8ZTV|1|a|A|975
8ZTV|1|a|G|976
*
8ZTV|1|a|C|987
8ZTV|1|a|A|988
8ZTV|1|a|G|989
8ZTV|1|a|A|990
8ZTV|1|a|C|991
*
8ZTV|1|a|G|1163
8ZTV|1|a|C|1164
*
8ZTV|1|a|G|1185
8ZTV|1|a|G|1186
8ZTV|1|a|G|1187
8ZTV|1|a|U|1188
8ZTV|1|a|A|1189
8ZTV|1|a|G|1190

Current chains

Chain a
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21
Chain y
50S ribosomal protein L30

Coloring options:

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