J7_9B4Z_002
3D structure
- PDB id
- 9B4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 9B4Z|1|BA|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B4Z|1|BA|C|817
9B4Z|1|BA|G|818
9B4Z|1|BA|A|819
9B4Z|1|BA|A|820
9B4Z|1|BA|A|821
9B4Z|1|BA|G|822
*
9B4Z|1|BA|C|835
9B4Z|1|BA|G|836
9B4Z|1|BA|C|837
9B4Z|1|BA|C|838
*
9B4Z|1|BA|G|940
9B4Z|1|BA|A|941
9B4Z|1|BA|G|942
9B4Z|1|BA|A|943
9B4Z|1|BA|C|944
9B4Z|1|BA|A|945
9B4Z|1|BA|C|946
*
9B4Z|1|BA|G|971
9B4Z|1|BA|A|972
9B4Z|1|BA|A|973
9B4Z|1|BA|G|974
9B4Z|1|BA|A|975
9B4Z|1|BA|G|976
*
9B4Z|1|BA|C|987
9B4Z|1|BA|A|988
9B4Z|1|BA|G|989
9B4Z|1|BA|A|990
9B4Z|1|BA|C|991
*
9B4Z|1|BA|G|1163
9B4Z|1|BA|C|1164
*
9B4Z|1|BA|G|1185
9B4Z|1|BA|G|1186
9B4Z|1|BA|G|1187
9B4Z|1|BA|U|1188
9B4Z|1|BA|A|1189
9B4Z|1|BA|G|1190
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B3
- 50S ribosomal protein L35
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BL
- 50S ribosomal protein L15
- Chain BQ
- 50S ribosomal protein L20
- Chain BR
- 50S ribosomal protein L21
- Chain BZ
- 50S ribosomal protein L30
Coloring options: