3D structure

PDB id
9B51 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
9B51|1|BA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B51|1|BA|C|8
9B51|1|BA|G|9
9B51|1|BA|A|10
9B51|1|BA|C|11
9B51|1|BA|U|12
9B51|1|BA|A|13
9B51|1|BA|A|14
9B51|1|BA|G|15
*
9B51|1|BA|U|525
9B51|1|BA|A|526
9B51|1|BA|C|527
9B51|1|BA|A|528
9B51|1|BA|A|529
9B51|1|BA|G|530
9B51|1|BA|C|531
*
9B51|1|BA|G|2018
9B51|1|BA|A|2019
9B51|1|BA|A|2020
9B51|1|BA|C|2021
9B51|1|BA|U|2022
9B51|1|BA|C|2023
*
9B51|1|BA|G|2040
9B51|1|BA|U|2041
9B51|1|BA|A|2042
9B51|1|BA|C|2043
*
9B51|1|BA|G|2625
9B51|1|BA|C|2626
9B51|1|BA|G|2627
9B51|1|BA|C|2628
9B51|1|BA|U|2629
9B51|1|BA|G|2630
*
9B51|1|BA|C|2788
9B51|1|BA|C|2789
*
9B51|1|BA|G|2894
9B51|1|BA|G|2895

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B0
50S ribosomal protein L32
Chain BD
50S ribosomal protein L3
Chain BJ
50S ribosomal protein L13
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BS
50S ribosomal protein L22

Coloring options:

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