3D structure

PDB id
9B51 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9B51|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B51|1|BA|C|817
9B51|1|BA|G|818
9B51|1|BA|A|819
9B51|1|BA|A|820
9B51|1|BA|A|821
9B51|1|BA|G|822
*
9B51|1|BA|C|835
9B51|1|BA|G|836
9B51|1|BA|C|837
9B51|1|BA|C|838
*
9B51|1|BA|G|940
9B51|1|BA|A|941
9B51|1|BA|G|942
9B51|1|BA|A|943
9B51|1|BA|C|944
9B51|1|BA|A|945
9B51|1|BA|C|946
*
9B51|1|BA|G|971
9B51|1|BA|A|972
9B51|1|BA|A|973
9B51|1|BA|G|974
9B51|1|BA|A|975
9B51|1|BA|G|976
*
9B51|1|BA|C|987
9B51|1|BA|A|988
9B51|1|BA|G|989
9B51|1|BA|A|990
9B51|1|BA|C|991
*
9B51|1|BA|G|1163
9B51|1|BA|C|1164
*
9B51|1|BA|G|1185
9B51|1|BA|G|1186
9B51|1|BA|G|1187
9B51|1|BA|U|1188
9B51|1|BA|A|1189
9B51|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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