J7_9BSS_001
3D structure
- PDB id
- 9BSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 45SRbgA particle in complex with RbgA and YphC. Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CC*GAC
- Length
- 37 nucleotides
- Bulged bases
- 9BSS|1|A|G|576, 9BSS|1|A|G|2050
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BSS|1|A|G|7
9BSS|1|A|U|8
9BSS|1|A|U|9
9BSS|1|A|A|10
9BSS|1|A|G|11
9BSS|1|A|A|12
9BSS|1|A|A|13
9BSS|1|A|A|14
9BSS|1|A|G|15
*
9BSS|1|A|U|571
9BSS|1|A|A|572
9BSS|1|A|C|573
9BSS|1|A|A|574
9BSS|1|A|A|575
9BSS|1|A|G|576
9BSS|1|A|U|577
*
9BSS|1|A|A|2047
9BSS|1|A|U|2048
9BSS|1|A|A|2049
9BSS|1|A|G|2050
9BSS|1|A|U|2051
9BSS|1|A|A|2052
*
9BSS|1|A|U|2069
9BSS|1|A|U|2070
9BSS|1|A|A|2071
9BSS|1|A|C|2072
*
9BSS|1|A|G|2654
9BSS|1|A|C|2655
9BSS|1|A|G|2656
9BSS|1|A|C|2657
9BSS|1|A|A|2658
9BSS|1|A|G|2659
*
9BSS|1|A|C|2817
9BSS|1|A|C|2818
*
9BSS|1|A|G|2918
9BSS|1|A|A|2919
9BSS|1|A|C|2920
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain G
- Large ribosomal subunit protein uL13
- Chain L
- Large ribosomal subunit protein bL20
- Chain N
- Large ribosomal subunit protein uL22
- Chain T
- Large ribosomal subunit protein bL32
Coloring options: