J7_9BSS_002
3D structure
- PDB id
- 9BSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 45SRbgA particle in complex with RbgA and YphC. Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
- Length
- 31 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BSS|1|A|C|864
9BSS|1|A|G|865
9BSS|1|A|A|866
9BSS|1|A|A|867
9BSS|1|A|A|868
9BSS|1|A|U|869
*
9BSS|1|A|A|882
9BSS|1|A|G|883
*
9BSS|1|A|U|989
9BSS|1|A|C|990
9BSS|1|A|A|991
9BSS|1|A|G|992
*
9BSS|1|A|C|1017
9BSS|1|A|G|1018
9BSS|1|A|A|1019
9BSS|1|A|A|1020
9BSS|1|A|A|1021
9BSS|1|A|G|1022
*
9BSS|1|A|C|1033
9BSS|1|A|A|1034
9BSS|1|A|G|1035
9BSS|1|A|A|1036
9BSS|1|A|C|1037
*
9BSS|1|A|G|1209
9BSS|1|A|A|1210
*
9BSS|1|A|U|1226
9BSS|1|A|G|1227
9BSS|1|A|G|1228
9BSS|1|A|U|1229
9BSS|1|A|A|1230
9BSS|1|A|G|1231
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain I
- Large ribosomal subunit protein uL15
- Chain L
- Large ribosomal subunit protein bL20
- Chain M
- Large ribosomal subunit protein bL21
- Chain S
- Large ribosomal subunit protein uL30
Coloring options: