J7_9F1D_001
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CG(OMC)UGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9F1D|1|B5|G|1793
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F1D|1|B5|C|1621
9F1D|1|B5|G|1622
9F1D|1|B5|A|1623
9F1D|1|B5|A|1624
9F1D|1|B5|G|1625
9F1D|1|B5|U|1626
*
9F1D|1|B5|A|1639
9F1D|1|B5|G|1640
*
9F1D|1|B5|U|1791
9F1D|1|B5|G|1792
9F1D|1|B5|G|1793
9F1D|1|B5|G|1794
*
9F1D|1|B5|C|1818
9F1D|1|B5|G|1819
9F1D|1|B5|OMC|1820
9F1D|1|B5|U|1821
9F1D|1|B5|G|1822
9F1D|1|B5|C|1823
*
9F1D|1|B5|G|1834
9F1D|1|B5|A|1835
9F1D|1|B5|A|1836
9F1D|1|B5|C|1837
9F1D|1|B5|G|1838
*
9F1D|1|B5|C|2016
9F1D|1|B5|C|2017
*
9F1D|1|B5|G|2121
9F1D|1|B5|A|2122
9F1D|1|B5|G|2123
9F1D|1|B5|U|2124
9F1D|1|B5|A|2125
9F1D|1|B5|G|2126
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B7
- 5S ribosomal RNA; 5S rRNA
- Chain BC
- 60S ribosomal protein L4
- Chain BF
- Ribosomal Protein uL30
- Chain BL
- Large ribosomal subunit protein eL13
- Chain BQ
- Large ribosomal subunit protein eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bb
- 60S ribosomal protein L29
- Chain Be
- Ribosomal protein L32
- Chain Bf
- 60S ribosomal protein L35a
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