J7_9GGR_002
3D structure
- PDB id
- 9GGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 33 nucleotides
- Bulged bases
- 9GGR|1|AV|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GGR|1|AV|C|817
9GGR|1|AV|G|818
9GGR|1|AV|A|819
9GGR|1|AV|A|820
9GGR|1|AV|A|821
9GGR|1|AV|G|822
*
9GGR|1|AV|C|835
9GGR|1|AV|G|836
9GGR|1|AV|C|837
*
9GGR|1|AV|G|942
9GGR|1|AV|A|943
9GGR|1|AV|C|944
9GGR|1|AV|A|945
9GGR|1|AV|C|946
*
9GGR|1|AV|G|971
9GGR|1|AV|A|972
9GGR|1|AV|A|973
9GGR|1|AV|G|974
9GGR|1|AV|A|975
9GGR|1|AV|G|976
*
9GGR|1|AV|C|987
9GGR|1|AV|A|988
9GGR|1|AV|G|989
9GGR|1|AV|A|990
9GGR|1|AV|C|991
*
9GGR|1|AV|G|1163
9GGR|1|AV|C|1164
*
9GGR|1|AV|G|1185
9GGR|1|AV|G|1186
9GGR|1|AV|G|1187
9GGR|1|AV|U|1188
9GGR|1|AV|A|1189
9GGR|1|AV|G|1190
Current chains
- Chain AV
- 23S ribosomal RNA
Nearby chains
- Chain AW
- 5S ribosomal RNA; 5S rRNA
- Chain Ag
- Large ribosomal subunit protein uL15
- Chain Al
- Large ribosomal subunit protein bL20
- Chain Am
- Large ribosomal subunit protein bL21
- Chain Au
- Large ribosomal subunit protein uL30
- Chain Ay
- Large ribosomal subunit protein bL35
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