J7_9GR1_001

3D structure

PDB id

9GR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-TEC complex in delivery state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

9GR1|1|a|C|2025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GR1|1|a|C|8
9GR1|1|a|G|9
9GR1|1|a|A|10
9GR1|1|a|C|11
9GR1|1|a|U|12
9GR1|1|a|A|13
9GR1|1|a|A|14
9GR1|1|a|G|15
*
9GR1|1|a|U|525
9GR1|1|a|A|526
9GR1|1|a|C|527
9GR1|1|a|A|528
9GR1|1|a|A|529
9GR1|1|a|G|530
9GR1|1|a|C|531
*
9GR1|1|a|G|2022
9GR1|1|a|A|2023
9GR1|1|a|A|2024
9GR1|1|a|C|2025
9GR1|1|a|U|2026
9GR1|1|a|C|2027
*
9GR1|1|a|G|2044
9GR1|1|a|U|2045
9GR1|1|a|A|2046
9GR1|1|a|C|2047
*
9GR1|1|a|G|2629
9GR1|1|a|C|2630
9GR1|1|a|G|2631
9GR1|1|a|C|2632
9GR1|1|a|U|2633
9GR1|1|a|G|2634
*
9GR1|1|a|C|2792
9GR1|1|a|C|2793
*
9GR1|1|a|G|2898
9GR1|1|a|G|2899

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain i

50S ribosomal protein L13

Chain p

50S ribosomal protein L20

Chain r

50S ribosomal protein L22

Chain z

50S ribosomal protein L32