3D structure

PDB id
9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-TEC complex in delivery state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.17 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
9GR1|1|a|A|947
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9GR1|1|a|C|819
9GR1|1|a|G|820
9GR1|1|a|A|821
9GR1|1|a|A|822
9GR1|1|a|A|823
9GR1|1|a|G|824
*
9GR1|1|a|C|837
9GR1|1|a|G|838
9GR1|1|a|C|839
*
9GR1|1|a|G|944
9GR1|1|a|A|945
9GR1|1|a|C|946
9GR1|1|a|A|947
9GR1|1|a|C|948
*
9GR1|1|a|G|973
9GR1|1|a|A|974
9GR1|1|a|A|975
9GR1|1|a|G|976
9GR1|1|a|A|977
9GR1|1|a|G|978
*
9GR1|1|a|C|989
9GR1|1|a|A|990
9GR1|1|a|G|991
9GR1|1|a|A|992
9GR1|1|a|C|993
*
9GR1|1|a|G|1165
9GR1|1|a|C|1166
*
9GR1|1|a|G|1187
9GR1|1|a|G|1188
9GR1|1|a|G|1189
9GR1|1|a|U|1190
9GR1|1|a|A|1191
9GR1|1|a|G|1192

Current chains

Chain a
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21
Chain y
50S ribosomal protein L30

Coloring options:

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