J7_9HA3_001

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

9HA3|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA3|1|A|C|8
9HA3|1|A|G|9
9HA3|1|A|A|10
9HA3|1|A|C|11
9HA3|1|A|U|12
9HA3|1|A|A|13
9HA3|1|A|A|14
9HA3|1|A|G|15
*
9HA3|1|A|U|525
9HA3|1|A|A|526
9HA3|1|A|C|527
9HA3|1|A|A|528
9HA3|1|A|A|529
9HA3|1|A|G|530
9HA3|1|A|C|531
*
9HA3|1|A|G|2018
9HA3|1|A|A|2019
9HA3|1|A|A|2020
9HA3|1|A|C|2021
9HA3|1|A|U|2022
9HA3|1|A|C|2023
*
9HA3|1|A|G|2040
9HA3|1|A|U|2041
9HA3|1|A|A|2042
9HA3|1|A|C|2043
*
9HA3|1|A|G|2625
9HA3|1|A|C|2626
9HA3|1|A|G|2627
9HA3|1|A|C|2628
9HA3|1|A|U|2629
9HA3|1|A|G|2630
*
9HA3|1|A|C|2788
9HA3|1|A|C|2789
*
9HA3|1|A|G|2894
9HA3|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain Q

Large ribosomal subunit protein bL20