3D structure

PDB id
9JSR (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S precursor - Erm complex (C-I)
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9JSR|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9JSR|1|A|C|817
9JSR|1|A|G|818
9JSR|1|A|A|819
9JSR|1|A|A|820
9JSR|1|A|A|821
9JSR|1|A|G|822
*
9JSR|1|A|C|835
9JSR|1|A|G|836
9JSR|1|A|C|837
9JSR|1|A|C|838
*
9JSR|1|A|G|940
9JSR|1|A|A|941
9JSR|1|A|G|942
9JSR|1|A|A|943
9JSR|1|A|C|944
9JSR|1|A|A|945
9JSR|1|A|C|946
*
9JSR|1|A|G|971
9JSR|1|A|A|972
9JSR|1|A|A|973
9JSR|1|A|G|974
9JSR|1|A|A|975
9JSR|1|A|G|976
*
9JSR|1|A|C|987
9JSR|1|A|A|988
9JSR|1|A|G|989
9JSR|1|A|A|990
9JSR|1|A|C|991
*
9JSR|1|A|G|1163
9JSR|1|A|C|1164
*
9JSR|1|A|G|1185
9JSR|1|A|G|1186
9JSR|1|A|G|1187
9JSR|1|A|U|1188
9JSR|1|A|A|1189
9JSR|1|A|G|1190

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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