3D structure

PDB id
9MOR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9MOR|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MOR|1|1|C|817
9MOR|1|1|G|818
9MOR|1|1|A|819
9MOR|1|1|A|820
9MOR|1|1|A|821
9MOR|1|1|G|822
*
9MOR|1|1|C|835
9MOR|1|1|G|836
9MOR|1|1|C|837
9MOR|1|1|C|838
*
9MOR|1|1|G|940
9MOR|1|1|A|941
9MOR|1|1|G|942
9MOR|1|1|A|943
9MOR|1|1|C|944
9MOR|1|1|A|945
9MOR|1|1|C|946
*
9MOR|1|1|G|971
9MOR|1|1|A|972
9MOR|1|1|A|973
9MOR|1|1|G|974
9MOR|1|1|A|975
9MOR|1|1|G|976
*
9MOR|1|1|C|987
9MOR|1|1|A|988
9MOR|1|1|G|989
9MOR|1|1|A|990
9MOR|1|1|C|991
*
9MOR|1|1|G|1163
9MOR|1|1|C|1164
*
9MOR|1|1|G|1185
9MOR|1|1|G|1186
9MOR|1|1|G|1187
9MOR|1|1|U|1188
9MOR|1|1|A|1189
9MOR|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain L
Large ribosomal subunit protein uL15
Chain Q
50S ribosomal protein L20
Chain R
Large ribosomal subunit protein bL21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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