J7_9MTS_001

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

9MTS|1|1A|A|945, 9MTS|1|1A|C|975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|1A|C|817
9MTS|1|1A|G|818
9MTS|1|1A|A|819
9MTS|1|1A|A|820
9MTS|1|1A|A|821
9MTS|1|1A|U|822
*
9MTS|1|1A|A|835
9MTS|1|1A|G|836
*
9MTS|1|1A|U|943
9MTS|1|1A|G|944
9MTS|1|1A|A|945
9MTS|1|1A|G|946
*
9MTS|1|1A|C|971
9MTS|1|1A|G|972
9MTS|1|1A|A|973
9MTS|1|1A|G|974
9MTS|1|1A|C|975
9MTS|1|1A|G|975|||A
9MTS|1|1A|C|976
*
9MTS|1|1A|G|987
9MTS|1|1A|A|988
9MTS|1|1A|G|989
9MTS|1|1A|A|990
9MTS|1|1A|C|991
*
9MTS|1|1A|G|1163
9MTS|1|1A|G|1164
*
9MTS|1|1A|C|1185
9MTS|1|1A|G|1186
9MTS|1|1A|G|1187
9MTS|1|1A|U|1188
9MTS|1|1A|A|1189
9MTS|1|1A|G|1190

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 13

50S ribosomal protein L30

Chain 18

50S ribosomal protein L35

Chain 1B

5S ribosomal RNA; 5S rRNA

Chain 1P

50S ribosomal protein L15

Chain 1U

50S ribosomal protein L20

Chain 1V

50S ribosomal protein L21