J7_9NL6_002
3D structure
- PDB id
- 9NL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 9NL6|1|R1|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NL6|1|R1|C|817
9NL6|1|R1|G|818
9NL6|1|R1|A|819
9NL6|1|R1|A|820
9NL6|1|R1|A|821
9NL6|1|R1|G|822
*
9NL6|1|R1|C|835
9NL6|1|R1|G|836
9NL6|1|R1|C|837
9NL6|1|R1|C|838
*
9NL6|1|R1|G|940
9NL6|1|R1|A|941
9NL6|1|R1|G|942
9NL6|1|R1|A|943
9NL6|1|R1|C|944
9NL6|1|R1|A|945
9NL6|1|R1|C|946
*
9NL6|1|R1|G|971
9NL6|1|R1|A|972
9NL6|1|R1|A|973
9NL6|1|R1|G|974
9NL6|1|R1|A|975
9NL6|1|R1|G|976
*
9NL6|1|R1|C|987
9NL6|1|R1|A|988
9NL6|1|R1|G|989
9NL6|1|R1|A|990
9NL6|1|R1|C|991
*
9NL6|1|R1|G|1163
9NL6|1|R1|C|1164
*
9NL6|1|R1|G|1185
9NL6|1|R1|G|1186
9NL6|1|R1|G|1187
9NL6|1|R1|U|1188
9NL6|1|R1|A|1189
9NL6|1|R1|G|1190
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 15
- Large ribosomal subunit protein uL15
- Chain 20
- Large ribosomal subunit protein bL20
- Chain 21
- Large ribosomal subunit protein bL21
- Chain 30
- 50S ribosomal protein L30
- Chain 35
- Large ribosomal subunit protein bL35
- Chain R2
- 5S ribosomal RNA; 5S rRNA
Coloring options: