J7_9QQP_001
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CG(OMC)UGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9QQP|1|A2|G|1656
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|A2|C|1479
9QQP|1|A2|G|1480
9QQP|1|A2|A|1481
9QQP|1|A2|A|1482
9QQP|1|A2|G|1483
9QQP|1|A2|U|1484
*
9QQP|1|A2|A|1497
9QQP|1|A2|G|1498
*
9QQP|1|A2|U|1654
9QQP|1|A2|G|1655
9QQP|1|A2|G|1656
9QQP|1|A2|G|1657
*
9QQP|1|A2|C|1681
9QQP|1|A2|G|1682
9QQP|1|A2|OMC|1683
9QQP|1|A2|U|1684
9QQP|1|A2|G|1685
9QQP|1|A2|C|1686
*
9QQP|1|A2|G|1697
9QQP|1|A2|A|1698
9QQP|1|A2|A|1699
9QQP|1|A2|C|1700
9QQP|1|A2|G|1701
*
9QQP|1|A2|C|1879
9QQP|1|A2|C|1880
*
9QQP|1|A2|G|2033
9QQP|1|A2|A|2034
9QQP|1|A2|G|2035
9QQP|1|A2|U|2036
9QQP|1|A2|A|2037
9QQP|1|A2|G|2038
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A1
- Large ribosomal subunit protein uL30
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain F1
- Large ribosomal subunit protein eL13
- Chain F2
- Large ribosomal subunit protein uL4
- Chain K2
- Large ribosomal subunit protein eL18
- Chain N2
- Large ribosomal subunit protein eL21
- Chain U2
- Large ribosomal subunit protein uL15
- Chain V2
- Large ribosomal subunit protein eL29
- Chain Y2
- Large ribosomal subunit protein eL32
- Chain Z2
- Large ribosomal subunit protein eL33
Coloring options: