3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9RTU|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTU|1|A|C|817
9RTU|1|A|G|818
9RTU|1|A|A|819
9RTU|1|A|A|820
9RTU|1|A|A|821
9RTU|1|A|G|822
*
9RTU|1|A|C|835
9RTU|1|A|G|836
9RTU|1|A|C|837
9RTU|1|A|C|838
*
9RTU|1|A|G|940
9RTU|1|A|A|941
9RTU|1|A|G|942
9RTU|1|A|A|943
9RTU|1|A|C|944
9RTU|1|A|A|945
9RTU|1|A|C|946
*
9RTU|1|A|G|971
9RTU|1|A|A|972
9RTU|1|A|A|973
9RTU|1|A|G|974
9RTU|1|A|A|975
9RTU|1|A|G|976
*
9RTU|1|A|C|987
9RTU|1|A|A|988
9RTU|1|A|G|989
9RTU|1|A|A|990
9RTU|1|A|C|991
*
9RTU|1|A|G|1163
9RTU|1|A|C|1164
*
9RTU|1|A|G|1185
9RTU|1|A|G|1186
9RTU|1|A|G|1187
9RTU|1|A|U|1188
9RTU|1|A|A|1189
9RTU|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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