3D structure

PDB id
9RTV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9RTV|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTV|1|A|C|817
9RTV|1|A|G|818
9RTV|1|A|A|819
9RTV|1|A|A|820
9RTV|1|A|A|821
9RTV|1|A|G|822
*
9RTV|1|A|C|835
9RTV|1|A|G|836
9RTV|1|A|C|837
9RTV|1|A|C|838
*
9RTV|1|A|G|940
9RTV|1|A|A|941
9RTV|1|A|G|942
9RTV|1|A|A|943
9RTV|1|A|C|944
9RTV|1|A|A|945
9RTV|1|A|C|946
*
9RTV|1|A|G|971
9RTV|1|A|A|972
9RTV|1|A|A|973
9RTV|1|A|G|974
9RTV|1|A|A|975
9RTV|1|A|G|976
*
9RTV|1|A|C|987
9RTV|1|A|A|988
9RTV|1|A|G|989
9RTV|1|A|A|990
9RTV|1|A|C|991
*
9RTV|1|A|G|1163
9RTV|1|A|C|1164
*
9RTV|1|A|G|1185
9RTV|1|A|G|1186
9RTV|1|A|G|1187
9RTV|1|A|U|1188
9RTV|1|A|A|1189
9RTV|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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