J7_9TEY_001

3D structure

PDB id

9TEY (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the terminating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

9TEY|1|V|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEY|1|V|C|8
9TEY|1|V|G|9
9TEY|1|V|A|10
9TEY|1|V|C|11
9TEY|1|V|U|12
9TEY|1|V|A|13
9TEY|1|V|A|14
9TEY|1|V|G|15
*
9TEY|1|V|U|525
9TEY|1|V|A|526
9TEY|1|V|C|527
9TEY|1|V|A|528
9TEY|1|V|A|529
9TEY|1|V|G|530
9TEY|1|V|C|531
*
9TEY|1|V|G|2018
9TEY|1|V|A|2019
9TEY|1|V|A|2020
9TEY|1|V|C|2021
9TEY|1|V|U|2022
9TEY|1|V|C|2023
*
9TEY|1|V|G|2040
9TEY|1|V|U|2041
9TEY|1|V|A|2042
9TEY|1|V|C|2043
*
9TEY|1|V|G|2625
9TEY|1|V|C|2626
9TEY|1|V|G|2627
9TEY|1|V|C|2628
9TEY|1|V|U|2629
9TEY|1|V|G|2630
*
9TEY|1|V|C|2788
9TEY|1|V|C|2789
*
9TEY|1|V|G|2894
9TEY|1|V|G|2895

Current chains

Chain V

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain i

Large ribosomal subunit protein uL13

Chain p

Large ribosomal subunit protein bL20

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32