3D structure

PDB id
9TEY (explore in PDB, NAKB, or RNA 3D Hub)
Description
DalDro bound to the terminating Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9TEY|1|V|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TEY|1|V|C|817
9TEY|1|V|G|818
9TEY|1|V|A|819
9TEY|1|V|A|820
9TEY|1|V|A|821
9TEY|1|V|G|822
*
9TEY|1|V|C|835
9TEY|1|V|G|836
9TEY|1|V|C|837
9TEY|1|V|C|838
*
9TEY|1|V|G|940
9TEY|1|V|A|941
9TEY|1|V|G|942
9TEY|1|V|A|943
9TEY|1|V|C|944
9TEY|1|V|A|945
9TEY|1|V|C|946
*
9TEY|1|V|G|971
9TEY|1|V|A|972
9TEY|1|V|A|973
9TEY|1|V|G|974
9TEY|1|V|A|975
9TEY|1|V|G|976
*
9TEY|1|V|C|987
9TEY|1|V|A|988
9TEY|1|V|G|989
9TEY|1|V|A|990
9TEY|1|V|C|991
*
9TEY|1|V|G|1163
9TEY|1|V|C|1164
*
9TEY|1|V|G|1185
9TEY|1|V|G|1186
9TEY|1|V|G|1187
9TEY|1|V|U|1188
9TEY|1|V|A|1189
9TEY|1|V|G|1190

Current chains

Chain V
23S rRNA

Nearby chains

Chain 2
Large ribosomal subunit protein bL35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
Large ribosomal subunit protein bL20
Chain q
Large ribosomal subunit protein bL21
Chain y
Large ribosomal subunit protein uL30

Coloring options:

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