J7_9TI7_001
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 9TI7|1|A|G|575, 9TI7|1|A|G|2048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TI7|1|A|U|8
9TI7|1|A|U|9
9TI7|1|A|A|10
9TI7|1|A|U|11
9TI7|1|A|U|12
9TI7|1|A|A|13
9TI7|1|A|A|14
9TI7|1|A|G|15
*
9TI7|1|A|U|570
9TI7|1|A|A|571
9TI7|1|A|C|572
9TI7|1|A|A|573
9TI7|1|A|A|574
9TI7|1|A|G|575
9TI7|1|A|U|576
*
9TI7|1|A|A|2045
9TI7|1|A|U|2046
9TI7|1|A|A|2047
9TI7|1|A|G|2048
9TI7|1|A|U|2049
9TI7|1|A|A|2050
*
9TI7|1|A|U|2067
9TI7|1|A|U|2068
9TI7|1|A|A|2069
9TI7|1|A|C|2070
*
9TI7|1|A|G|2652
9TI7|1|A|C|2653
9TI7|1|A|G|2654
9TI7|1|A|U|2655
9TI7|1|A|A|2656
9TI7|1|A|G|2657
*
9TI7|1|A|C|2815
9TI7|1|A|C|2816
*
9TI7|1|A|G|2913
9TI7|1|A|A|2914
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein bL32
- Chain H
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L13
- Chain T
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L22
Coloring options: