J7_9TI8_002
3D structure
- PDB id
- 9TI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.18 Å
Loop
- Sequence
- CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 9TI8|1|A|A|989
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TI8|1|A|C|862
9TI8|1|A|G|863
9TI8|1|A|A|864
9TI8|1|A|A|865
9TI8|1|A|A|866
9TI8|1|A|U|867
*
9TI8|1|A|A|880
9TI8|1|A|G|881
*
9TI8|1|A|U|987
9TI8|1|A|C|988
9TI8|1|A|A|989
9TI8|1|A|G|990
*
9TI8|1|A|C|1015
9TI8|1|A|G|1016
9TI8|1|A|A|1017
9TI8|1|A|A|1018
9TI8|1|A|A|1019
9TI8|1|A|G|1020
*
9TI8|1|A|C|1031
9TI8|1|A|A|1032
9TI8|1|A|G|1033
9TI8|1|A|A|1034
9TI8|1|A|C|1035
*
9TI8|1|A|G|1207
9TI8|1|A|A|1208
*
9TI8|1|A|U|1224
9TI8|1|A|G|1225
9TI8|1|A|G|1226
9TI8|1|A|U|1227
9TI8|1|A|A|1228
9TI8|1|A|G|1229
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L30
- Chain 8
- 50S ribosomal protein L35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain O
- 50S ribosomal protein L15
- Chain T
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L21
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