3D structure

PDB id
9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
9ZN2|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZN2|1|A|C|817
9ZN2|1|A|G|818
9ZN2|1|A|A|819
9ZN2|1|A|A|820
9ZN2|1|A|A|821
9ZN2|1|A|G|822
*
9ZN2|1|A|C|835
9ZN2|1|A|G|836
9ZN2|1|A|C|837
9ZN2|1|A|C|838
*
9ZN2|1|A|G|940
9ZN2|1|A|A|941
9ZN2|1|A|G|942
9ZN2|1|A|A|943
9ZN2|1|A|C|944
9ZN2|1|A|A|945
9ZN2|1|A|C|946
*
9ZN2|1|A|G|971
9ZN2|1|A|A|972
9ZN2|1|A|A|973
9ZN2|1|A|G|974
9ZN2|1|A|A|975
9ZN2|1|A|G|976
*
9ZN2|1|A|C|987
9ZN2|1|A|A|988
9ZN2|1|A|G|989
9ZN2|1|A|A|990
9ZN2|1|A|C|991
*
9ZN2|1|A|G|1163
9ZN2|1|A|C|1164
*
9ZN2|1|A|G|1185
9ZN2|1|A|G|1186
9ZN2|1|A|G|1187
9ZN2|1|A|U|1188
9ZN2|1|A|A|1189
9ZN2|1|A|G|1190

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L15
Chain S
50S ribosomal protein L20
Chain T
Ribosomal protein L21

Coloring options:

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