3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
9ZTL|1|a|U|12, 9ZTL|1|a|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZTL|1|a|C|8
9ZTL|1|a|G|9
9ZTL|1|a|A|10
9ZTL|1|a|C|11
9ZTL|1|a|U|12
9ZTL|1|a|A|13
9ZTL|1|a|A|14
9ZTL|1|a|G|15
*
9ZTL|1|a|U|525
9ZTL|1|a|A|526
9ZTL|1|a|C|527
9ZTL|1|a|A|528
9ZTL|1|a|A|529
9ZTL|1|a|G|530
9ZTL|1|a|C|531
*
9ZTL|1|a|G|2018
9ZTL|1|a|A|2019
9ZTL|1|a|A|2020
9ZTL|1|a|C|2021
9ZTL|1|a|U|2022
9ZTL|1|a|C|2023
*
9ZTL|1|a|G|2040
9ZTL|1|a|U|2041
9ZTL|1|a|A|2042
9ZTL|1|a|C|2043
*
9ZTL|1|a|G|2625
9ZTL|1|a|C|2626
9ZTL|1|a|G|2627
9ZTL|1|a|C|2628
9ZTL|1|a|U|2629
9ZTL|1|a|G|2630
*
9ZTL|1|a|C|2788
9ZTL|1|a|C|2789
*
9ZTL|1|a|G|2894
9ZTL|1|a|G|2895

Current chains

Chain a
23s rRNA

Nearby chains

Chain d
50S ribosomal protein L3
Chain i
50S ribosomal protein L13
Chain p
50S ribosomal protein L20
Chain r
Large ribosomal subunit protein uL22
Chain z
50S ribosomal protein L32

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 1.0458 s