3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
9ZTL|1|a|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZTL|1|a|C|817
9ZTL|1|a|G|818
9ZTL|1|a|A|819
9ZTL|1|a|A|820
9ZTL|1|a|A|821
9ZTL|1|a|G|822
*
9ZTL|1|a|C|835
9ZTL|1|a|G|836
9ZTL|1|a|C|837
*
9ZTL|1|a|G|942
9ZTL|1|a|A|943
9ZTL|1|a|C|944
9ZTL|1|a|A|945
9ZTL|1|a|C|946
*
9ZTL|1|a|G|971
9ZTL|1|a|A|972
9ZTL|1|a|A|973
9ZTL|1|a|G|974
9ZTL|1|a|A|975
9ZTL|1|a|G|976
*
9ZTL|1|a|C|987
9ZTL|1|a|A|988
9ZTL|1|a|G|989
9ZTL|1|a|A|990
9ZTL|1|a|C|991
*
9ZTL|1|a|G|1163
9ZTL|1|a|C|1164
*
9ZTL|1|a|G|1185
9ZTL|1|a|G|1186
9ZTL|1|a|G|1187
9ZTL|1|a|U|1188
9ZTL|1|a|A|1189
9ZTL|1|a|G|1190

Current chains

Chain a
23s rRNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain b
5S ribosomal RNA; 5S rRNA
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21
Chain y
Large ribosomal subunit protein uL30

Coloring options:

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